PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0171s0035.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 289aa    MW: 30658.7 Da    PI: 4.2467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0171s0035.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.7e-1878128155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          s y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  Kalax.0171s0035.1.p  78 SVYRGVRKRA-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 128
                          78*****887.**********843...6**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.4E-1378128IPR001471AP2/ERF domain
CDDcd000183.89E-3178136No hitNo description
SuperFamilySSF541712.42E-2178137IPR016177DNA-binding domain
SMARTSM003808.8E-3579142IPR001471AP2/ERF domain
PROSITE profilePS5103223.6779136IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-3179137IPR001471AP2/ERF domain
PRINTSPR003672.0E-108091IPR001471AP2/ERF domain
PRINTSPR003672.0E-10102118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MELPLLSLIQ SPPPPVIQSS TSSPSSSSSS DSMASSHADQ IAVSNSAECC AAENITAAVS  60
GETETGSKRR SNADEKHSVY RGVRKRAWGK WVSEIREPRK KSRIWLGTYP TAEMAARAHD  120
VAALAIKGGS AFLNFPQLAD RLPRPATSCP KDIQAAASEA AAATFEITGD EEEGDRSLTT  180
TTTHSISSSS SSESLLELSS SMAQNDQVEN DLFDLPELVI TVGGDAFYDL PDLFNDDGMA  240
AGMTIGATGD LSSLYGSAAW QLAGADTSDA FRVEDPIHWE YNNYLIDI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-1680136360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771308.13e-57PREDICTED: ethylene-responsive transcription factor ERF039-like
RefseqXP_016435910.13e-57PREDICTED: ethylene-responsive transcription factor ERF039-like
SwissprotQ8LBQ75e-54ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLV4LH869e-56V4LH86_EUTSA; Uncharacterized protein
STRINGSolyc01g090560.2.12e-54(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.19e-47ERF family protein